The conclusion of the Xindi saga cliffhanger when Earth was attacked by a Xindi probe — a massive weapon which Archer must now destroy — is where Season 3 begins. This mission is the main story arc for the entire season, with subplots focusing on the five-species Xindi council.
| Title | Time | Price | ||
|---|---|---|---|---|
| 1 | The Xindi | 43:02 | USD 2.99 | |
| 2 | Anomaly | 43:01 | USD 2.99 | |
| 3 | Extinction | 43:01 | USD 2.99 | |
| 4 | Rajin | 43:02 | USD 2.99 | |
| 5 | Impulse | 43:02 | USD 2.99 | |
| 6 | Exile | 43:02 | USD 2.99 | |
| 7 | The Shipment | 43:02 | USD 2.99 | |
| 8 | Twilight | 43:01 | USD 2.99 | |
| 9 | North Star | 43:02 | USD 2.99 | |
| 10 | Similitude | 43:02 | USD 2.99 | |
| 11 | Carpenter Street | 43:02 | USD 2.99 | |
| 12 | Chosen Realm | 43:02 | USD 2.99 | |
| 13 | Proving Ground | 43:02 | USD 2.99 | |
| 14 | Strategem | 43:02 | USD 2.99 | |
| 15 | Harbinger | 43:02 | USD 2.99 | |
| 16 | Doctor's Orders | 43:02 | USD 2.99 | |
| 17 | Hatchery | 43:02 | USD 2.99 | |
| 18 | Azati Prime | 43:02 | USD 2.99 | |
| 19 | Damage | 43:01 | USD 2.99 | |
| 20 | The Forgotten | 43:01 | USD 2.99 | |
| 21 | E² | 43:01 | USD 2.99 | |
| 22 | The Council | 43:01 | USD 2.99 | |
| 23 | Countdown | 43:01 | USD 2.99 | |
| 24 | Zero Hour | 43:01 | USD 2.99 |
